Last updated on 2026-04-15 03:06:05 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.72 | 317.72 | 331.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.58 | 280.01 | 290.59 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 345.52 | 376.52 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 198.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 17.39 | 342.95 | 360.34 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.92 | 348.12 | 361.04 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 442.00 | 454.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 0.00 | 18.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 650.00 | 661.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 243.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/397s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.616, system: 0.062, elapsed: 3.360 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.799, system: 0.257, elapsed: 18.051 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.432, system: 0.033, elapsed: 0.854 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.072, system: 0.874, elapsed: 85.194 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.008, elapsed: 0.670 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.699, system: 1.332, elapsed: 109.377 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.662, system: 0.058, elapsed: 5.612 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.666, system: 0.147, elapsed: 27.474 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.025, elapsed: 1.139 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.080, system: 0.910, elapsed: 125.160 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.008, elapsed: 0.353 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.443, system: 1.387, elapsed: 161.639 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.655, system: 0.064, elapsed: 3.505 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.922, system: 0.274, elapsed: 17.233 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.321, system: 0.019, elapsed: 1.263 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.533, system: 0.749, elapsed: 61.107 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.002, elapsed: 0.188 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.277, system: 0.317, elapsed: 1.043 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.583, system: 1.470, elapsed: 85.482 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.499, system: 0.034, elapsed: 1.545 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.402, system: 0.041, elapsed: 9.600 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.016, elapsed: 0.231 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.227, system: 0.633, elapsed: 6.981 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.171 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.106, system: 0.786, elapsed: 12.339 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.365, system: 1.559, elapsed: 31.674 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/596s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.622, system: 0.056, elapsed: 3.136 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.489, system: 0.084, elapsed: 15.869 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.019, elapsed: 1.149 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.426, system: 0.730, elapsed: 53.564 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.310 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.501, system: 0.922, elapsed: 75.080 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.034, elapsed: 2.788 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.742, system: 0.083, elapsed: 20.209 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.020, elapsed: 1.139 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.919, system: 1.007, elapsed: 103.107 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.013, elapsed: 0.397 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.229, system: 1.186, elapsed: 128.714 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.723, system: 0.065, elapsed: 4.037 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.807, system: 0.149, elapsed: 28.579 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.024, elapsed: 1.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.900, system: 0.950, elapsed: 163.608 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.247 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.206, system: 0.257, elapsed: 1.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.752, system: 1.539, elapsed: 200.708 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.606, system: 0.038, elapsed: 2.674 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.543, system: 0.080, elapsed: 15.296 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.018, elapsed: 1.146 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.863, system: 0.869, elapsed: 114.491 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.327 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.485, system: 0.674, elapsed: 47.454 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.574, system: 1.720, elapsed: 182.505 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64