Hidden State Speciation and Extinction R package hisse version 2.1.11 CRAN Task View: Phylogenetics (https://CRAN.R-project.org/view=Phylogenetics) Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification. Beaulieu and O'Meara (2016) <doi:10.1093/sysbio/syw022>. Software Depends: ape, deSolve, GenSA, subplex, nloptr Imports: parallel, phytools, data.table, igraph, methods, diversitree, paleotree, plotrix, geiger, phangorn, TreeSim, corHMM Suggests: testthat, knitr, rmarkdown, markdown Jeremy Beaulieu <jmbeauli@uark.edu> Comprehensive R Archive Network (CRAN) Jeremy Beaulieu [aut, cre], Brian O'Meara [aut], Daniel Caetano [aut], James Boyko [aut], Thais Vasconcelos [aut] GPL (>= 2) 2023-02-11 application/tgz https://CRAN.R-project.org/package=hisse doi:10.32614/CRAN.package.hisse