AMDconfigurations: Geometric Analysis of Configurations in High-Dimensional Spaces
Computes Average Membership Degree (AMD) from soft-membership
matrices and constructs AMD curves across candidate configuration counts.
The current curve backend uses repeated fuzzy c-means fits while keeping
the AMD definition, membership estimation, curve construction, and final
assignment as separate operations. Fitted memberships, convergence
diagnostics, preprocessing transformations, seeds, row maps, and
process-level reproducibility links are retained. The package reports
numerical curve features but leaves their scientific interpretation to an
explicitly justified analysis. The method was introduced by Mendoza and
Araújo (2022) <doi:10.1111/ecog.06289>.
| Version: |
0.2.1 |
| Depends: |
R (≥ 4.1) |
| Imports: |
e1071 (≥ 1.7-17), grDevices, graphics, stats, utils |
| Suggests: |
testthat (≥ 3.2.0), knitr, rmarkdown, ranger (≥ 0.18.0), digest (≥ 0.6.27) |
| Published: |
2026-10-12 |
| DOI: |
10.32614/CRAN.package.AMDconfigurations |
| Author: |
Manuel Mendoza 
[aut, cre] |
| Maintainer: |
Manuel Mendoza <mmendoza at mncn.csic.es> |
| BugReports: |
https://github.com/mmendoza1967/AMDconfigurations/issues |
| License: |
MIT + file LICENSE |
| Copyright: |
see file COPYRIGHTS |
| URL: |
https://github.com/mmendoza1967/AMDconfigurations,
https://mmendoza1967.github.io/AMDconfigurations/ |
| NeedsCompilation: |
no |
| Citation: |
AMDconfigurations citation info |
| Materials: |
README, NEWS |
| CRAN checks: |
AMDconfigurations results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=AMDconfigurations
to link to this page.