BEDMatrix: Extract Genotypes from a PLINK .bed File

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<>), the whole genome association analysis toolset, without loading the entire file into memory.

Version: 2.0.3
Depends: R (≥ 3.0.2)
Imports: methods, crochet (≥ 2.3.0)
Suggests: data.table, LinkedMatrix, tinytest
Published: 2020-07-08
DOI: 10.32614/CRAN.package.BEDMatrix
Author: Alexander Grueneberg [aut, cre], Gustavo de los Campos [ctb]
Maintainer: Alexander Grueneberg <cran at>
License: MIT + file LICENSE
NeedsCompilation: yes
Citation: BEDMatrix citation info
Materials: README NEWS
CRAN checks: BEDMatrix results


Reference manual: BEDMatrix.pdf


Package source: BEDMatrix_2.0.3.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): BEDMatrix_2.0.3.tgz, r-oldrel (arm64): BEDMatrix_2.0.3.tgz, r-release (x86_64): BEDMatrix_2.0.3.tgz, r-oldrel (x86_64): BEDMatrix_2.0.3.tgz
Old sources: BEDMatrix archive

Reverse dependencies:

Reverse depends: BGData, EBPRS
Reverse imports: mrMLM, phers
Reverse suggests: gcatest, genio, groupedSurv, lfa, popkin, simtrait, symDMatrix


Please use the canonical form to link to this page.