BGGE: Bayesian Genomic Linear Models Applied to GE Genome Selection

Application of genome prediction for a continuous variable, focused on genotype by environment (GE) genomic selection models (GS). It consists a group of functions that help to create regression kernels for some GE genomic models proposed by Jarquín et al. (2014) <doi:10.1007/s00122-013-2243-1> and Lopez-Cruz et al. (2015) <doi:10.1534/g3.114.016097>. Also, it computes genomic predictions based on Bayesian approaches. The prediction function uses an orthogonal transformation of the data and specific priors present by Cuevas et al. (2014) <doi:10.1534/g3.114.013094>.

Version: 0.6.5
Depends: R (≥ 3.1.1)
Imports: stats
Suggests: BGLR, coda
Published: 2018-08-10
DOI: 10.32614/CRAN.package.BGGE
Author: Italo Granato [aut, cre], Luna-Vázquez Francisco J. [aut], Cuevas Jaime [aut]
Maintainer: Italo Granato <italo.granato at>
License: GPL-3
NeedsCompilation: no
Materials: NEWS
In views: Agriculture
CRAN checks: BGGE results


Reference manual: BGGE.pdf


Package source: BGGE_0.6.5.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): BGGE_0.6.5.tgz, r-oldrel (arm64): BGGE_0.6.5.tgz, r-release (x86_64): BGGE_0.6.5.tgz, r-oldrel (x86_64): BGGE_0.6.5.tgz
Old sources: BGGE archive


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