## ----echo=FALSE,message=FALSE,results='hide'---------------------------------- options(markdown.HTML.stylesheet = 'extra/manual.css') library(knitr) options(digits=3) require(graphics) set.seed(2) ## ----message=FALSE,results='hide',echo=FALSE---------------------------------- library(BayesFactor) options(BFprogress = FALSE) bfversion = BFInfo() session = sessionInfo()[[1]] rversion = paste(session$version.string," on ",session$platform,sep="") ## ----------------------------------------------------------------------------- data(puzzles) bf = anovaBF(RT ~ shape*color + ID, whichRandom = "ID", data = puzzles) bf ## ----------------------------------------------------------------------------- prior.odds = newPriorOdds(bf, type = "equal") prior.odds ## ----------------------------------------------------------------------------- priorOdds(prior.odds) <- c(4,3,2,1) prior.odds ## ----------------------------------------------------------------------------- post.odds = prior.odds * bf post.odds ## ----------------------------------------------------------------------------- post.prob = as.BFprobability(post.odds) post.prob ## ----------------------------------------------------------------------------- post.prob / .5 ## ----------------------------------------------------------------------------- post.prob[1:3] ## ----------------------------------------------------------------------------- post.prob[1:3] / 1