MetaNet: Network Analysis for Omics Data

Comprehensive network analysis package. Calculate correlation network fastly, accelerate lots of analysis by parallel computing. Support for multi-omics data, search sub-nets fluently. Handle bigger data, more than 10,000 nodes in each omics. Offer various layout method for multi-omics network and some interfaces to other software ('Gephi', 'Cytoscape', 'ggplot2'), easy to visualize. Provide comprehensive topology indexes calculation, including ecological network stability.

Version: 0.1.2
Depends: R (≥ 4.1.0), igraph (≥ 1.3.5)
Imports: graphics, dplyr, ggplot2 (≥ 3.2.0), ggnewscale, ggrepel, RColorBrewer, grDevices, magrittr, reshape2, stats, tibble, utils, pcutils (≥ 0.2.5), rlang
Suggests: pheatmap, vegan, stringr, foreach, doSNOW, snow, knitr, rmarkdown, prettydoc, Hmisc, gifski, ggraph, networkD3, ggpmisc, ggtree, treeio, circlize, ggpubr
Published: 2024-03-25
DOI: 10.32614/CRAN.package.MetaNet
Author: Chen Peng ORCID iD [aut, cre]
Maintainer: Chen Peng <pengchen2001 at>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: MetaNet results


Reference manual: MetaNet.pdf
Vignettes: MetaNet


Package source: MetaNet_0.1.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): MetaNet_0.1.2.tgz, r-oldrel (arm64): MetaNet_0.1.2.tgz, r-release (x86_64): MetaNet_0.1.2.tgz, r-oldrel (x86_64): MetaNet_0.1.2.tgz
Old sources: MetaNet archive

Reverse dependencies:

Reverse suggests: pctax, ReporterScore


Please use the canonical form to link to this page.