SomaDataIO: Input/Output 'SomaScan' Data
Load and export 'SomaScan' data via the 'Standard BioTools, Inc.' structured text file called an ADAT ('*.adat'). For file format see <https://github.com/SomaLogic/SomaLogic-Data/blob/main/README.md>. The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
| Version: | 6.2.0 |
| Depends: | R (≥ 4.1.0) |
| Imports: | cli, dplyr (≥ 1.0.6), lifecycle (≥ 1.0.0), magrittr (≥ 2.0.1), methods, readxl (≥ 1.3.1), tibble (≥ 3.1.2), tidyr (≥ 1.1.3) |
| Suggests: | Biobase, ggplot2, knitr, purrr, recipes, rlang, rmarkdown, spelling, testthat (≥ 3.0.0), usethis (≥ 2.0.1), withr |
| Published: | 2025-02-07 |
| DOI: | 10.32614/CRAN.package.SomaDataIO |
| Author: | Stu Field  [aut],
Caleb Scheidel [cre],
Standard BioTools, Inc. [cph, fnd] |
| Maintainer: | Caleb Scheidel <calebjscheidel at gmail.com> |
| BugReports: | https://github.com/SomaLogic/SomaDataIO/issues |
| License: | MIT + file LICENSE |
| Copyright: | Standard BioTools, Inc. 2025 |
| URL: | https://somalogic.github.io/SomaDataIO/, https://somalogic.com |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | README NEWS |
| CRAN checks: | SomaDataIO results |
Documentation:
| Reference manual: | SomaDataIO.pdf |
| Vignettes: |
Introduction to SomaDataIO (source, R code) |
Downloads:
| Package source: | SomaDataIO_6.2.0.tar.gz |
| Windows binaries: | r-devel: SomaDataIO_6.2.0.zip, r-release: SomaDataIO_6.2.0.zip, r-oldrel: SomaDataIO_6.2.0.zip |
| macOS binaries: | r-devel (arm64): SomaDataIO_6.2.0.tgz, r-release (arm64): SomaDataIO_6.2.0.tgz, r-oldrel (arm64): SomaDataIO_6.2.0.tgz, r-devel (x86_64): SomaDataIO_6.2.0.tgz, r-release (x86_64): SomaDataIO_6.2.0.tgz, r-oldrel (x86_64): SomaDataIO_6.2.0.tgz |
| Old sources: | SomaDataIO archive |
Reverse dependencies:
| Reverse suggests: | SomaScan.db |
Linking:
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