## ----echo=FALSE, warning=FALSE, message=FALSE, results='hide'----------------- EXPORT_PNG <- FALSE ## ----echo=TRUE, warning=FALSE, message=FALSE---------------------------------- library(campsismod) ## ----------------------------------------------------------------------------- pk_model <- model_suite$pk$`2cpt_fo` ## ----echo=TRUE, warning=FALSE, message=FALSE---------------------------------- pd_model <- model_suite$pd$effect_cmt_model pd_model ## ----------------------------------------------------------------------------- pd_model <- pd_model %>% replace(Equation("PK_CONC", "A_CENTRAL/VC")) ## ----------------------------------------------------------------------------- pkpd_model <- pk_model %>% add(pd_model) pkpd_model ## ----eval=EXPORT_PNG---------------------------------------------------------- # library(campsis) # dataset <- Dataset(25) %>% # add(Bolus(time=0, amount=1000, compartment=1, ii=12, addl=2)) %>% # add(Observations(times=0:36)) # results <- pkpd_model %>% simulate(dataset=dataset, seed=1) # shadedPlot(results, "CONC") ## ----eval=EXPORT_PNG---------------------------------------------------------- # shadedPlot(results, "CONC") ## ----eval=EXPORT_PNG, echo=FALSE, results='hide'------------------------------ # ggplot2::ggsave(filename="resources/pkpd_model_concentration.png", width=7, height=3, dpi=100) ## ----eval=EXPORT_PNG---------------------------------------------------------- # shadedPlot(results, "EFFECT") ## ----eval=EXPORT_PNG, echo=FALSE, results='hide'------------------------------ # ggplot2::ggsave(filename="resources/pkpd_model_effect.png", width=7, height=3, dpi=100)