## ----setup, include=FALSE----------------------------------------------------- knitr::opts_chunk$set(collapse = TRUE, comment = "#>") library(gp3bayes) ## ----------------------------------------------------------------------------- backend_capabilities() validate_backend_environment("rstan") validate_backend_environment("cmdstanr") ## ----eval=FALSE--------------------------------------------------------------- # validate_backend_environment("rstan", compile_test = TRUE) # validate_backend_environment("cmdstanr", compile_test = TRUE) ## ----------------------------------------------------------------------------- rstan_summary <- data.frame( variable = c("b_Intercept", "b_conditiontreatment"), mean = c(-0.60, 0.40), sd = c(0.20, 0.15), mcse_mean = c(0.01, 0.01) ) cmdstanr_summary <- data.frame( variable = c("b_Intercept", "b_conditiontreatment"), mean = c(-0.59, 0.41), sd = c(0.21, 0.15), mcse_mean = c(0.01, 0.01) ) parity <- audit_backend_parity( rstan_summary, cmdstanr_summary ) parity plot(parity) ## ----eval=FALSE--------------------------------------------------------------- # parity <- audit_backend_parity( # fit_rstan, # fit_cmdstanr, # variables = c("b_Intercept", "b_conditiontreatment") # ) ## ----------------------------------------------------------------------------- contract <- create_model_contract( "binary", "selected", "participant_id", condition_col = "condition" ) schema <- capture_gp3bayes_schema(contract) schema validation <- validate_gp3bayes_schema(contract, schema) validation ## ----------------------------------------------------------------------------- frozen_schema <- freeze_gp3bayes_schema(schema) schema_file <- tempfile(fileext = ".rds") freeze_gp3bayes_schema(frozen_schema, schema_file) read_gp3bayes_schema(schema_file) unlink(schema_file)