isopam: Clustering of Sites with Species Data

Clustering algorithm developed for use with plot inventories of species. It groups plots by subsets of diagnostic species rather than overall species composition. There is an unsupervised and a supervised mode, the latter accepting suggestions for species with greater weight and cluster medoids.

Version: 2.0
Depends: R (≥ 3.5.0), vegan, cluster, future, future.apply, methods
Imports: grDevices, graphics, stats, utils, proxy, ggplot2, tibble
Published: 2024-01-09
DOI: 10.32614/CRAN.package.isopam
Author: Sebastian Schmidtlein ORCID iD [aut, cre], Jason Collison [aut], Robin Pfannendoerfer [aut], Lubomir Tichy [ctb]
Maintainer: Sebastian Schmidtlein <schmidtlein at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Citation: isopam citation info
CRAN checks: isopam results


Reference manual: isopam.pdf


Package source: isopam_2.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): isopam_2.0.tgz, r-oldrel (arm64): isopam_2.0.tgz, r-release (x86_64): isopam_2.0.tgz, r-oldrel (x86_64): isopam_2.0.tgz
Old sources: isopam archive


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