phylin: Spatial Interpolation of Genetic Data

The spatial interpolation of genetic distances between samples is based on a modified kriging method that accepts a genetic distance matrix and generates a map of probability of lineage presence. This package also offers tools to generate a map of potential contact zones between groups with user-defined thresholds in the tree to account for old and recent divergence. Additionally, it has functions for IDW interpolation using genetic data and midpoints.

Version: 2.0.2
Suggests: geometry, raster, gdistance
Published: 2019-12-12
DOI: 10.32614/CRAN.package.phylin
Author: Pedro Tarroso, Guillermo Velo-Anton, Silvia Carvalho
Maintainer: Pedro Tarroso <ptarroso at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Citation: phylin citation info
In views: MissingData
CRAN checks: phylin results


Reference manual: phylin.pdf
Vignettes: Phylin: a step-by-step tutorial
Phylin with resistance


Package source: phylin_2.0.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): phylin_2.0.2.tgz, r-oldrel (arm64): phylin_2.0.2.tgz, r-release (x86_64): phylin_2.0.2.tgz, r-oldrel (x86_64): phylin_2.0.2.tgz
Old sources: phylin archive


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